WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38A1.5.1 Sequence Name  F38A1.5.1
Length (nt)  1456   Chromosome Location  IV: 1249192-1251342
Chromosome . Primary Identifier  IV Chromosome Location . Start  1249192
Chromosome Location . End  1251342 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38A1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009518 clec-166 F38A1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A1.5 F38A1.5 1401   IV: 1249245-1249278

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38A1.5.1 1249192 1251342 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113227   87   IV: 1249192-1249278 Caenorhabditis elegans
Exon113228   125   IV: 1249331-1249455 Caenorhabditis elegans
Exon113229   86   IV: 1249776-1249861 Caenorhabditis elegans
Exon113230   148   IV: 1249907-1250054 Caenorhabditis elegans
Exon113231   240   IV: 1250108-1250347 Caenorhabditis elegans
Exon113232   94   IV: 1250401-1250494 Caenorhabditis elegans
Exon113233   190   IV: 1250541-1250730 Caenorhabditis elegans
Exon113234   270   IV: 1250800-1251069 Caenorhabditis elegans
Exon113235   216   IV: 1251127-1251342 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38A1.5.1 1249192 1251342 -1

1 Sequence

Length
1456

1 Sequence Ontology Term

Identifier Name Description
transcript