WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F38A1.8.1 Sequence Name  F38A1.8.1
Length (nt)  2653   Chromosome Location  IV: 1232825-1239852
Chromosome . Primary Identifier  IV Chromosome Location . Start  1232825
Chromosome Location . End  1239852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38A1.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009521 F38A1.8 F38A1.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F38A1.8 F38A1.8 1878   IV: 1233532-1233837

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F38A1.8.1 1232825 1239852 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113196   1013   IV: 1232825-1233837 Caenorhabditis elegans
Exon113197   233   IV: 1234696-1234928 Caenorhabditis elegans
Exon113198   306   IV: 1235501-1235806 Caenorhabditis elegans
Exon113199   116   IV: 1236495-1236610 Caenorhabditis elegans
Exon113200   134   IV: 1237009-1237142 Caenorhabditis elegans
Exon113201   474   IV: 1238187-1238660 Caenorhabditis elegans
Exon113202   105   IV: 1239286-1239390 Caenorhabditis elegans
Exon113203   147   IV: 1239437-1239583 Caenorhabditis elegans
Exon113204   125   IV: 1239728-1239852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F38A1.8.1 1232825 1239852 -1

1 Sequence

Length
2653

1 Sequence Ontology Term

Identifier Name Description
transcript