WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y104H12D.3a.1 Sequence Name  Y104H12D.3a.1
Length (nt)  2284   Chromosome Location  IV: 1193065-1201901
Chromosome . Primary Identifier  IV Chromosome Location . Start  1193065
Chromosome Location . End  1201901 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y104H12D.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022427 spl-3 Y104H12D.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y104H12D.3a Y104H12D.3a 1821   IV: 1193076-1193192

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y104H12D.3a.1 1193065 1201901 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113151   128   IV: 1193065-1193192 Caenorhabditis elegans
Exon113155   201   IV: 1193825-1194025 Caenorhabditis elegans
Exon113157   153   IV: 1195117-1195269 Caenorhabditis elegans
Exon113159   294   IV: 1195875-1196168 Caenorhabditis elegans
Exon113161   279   IV: 1197931-1198209 Caenorhabditis elegans
Exon113165   351   IV: 1199532-1199882 Caenorhabditis elegans
Exon113167   125   IV: 1200393-1200517 Caenorhabditis elegans
Exon113169   153   IV: 1200568-1200720 Caenorhabditis elegans
Exon113172   600   IV: 1201302-1201901 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y104H12D.3a.1 1193065 1201901 1

1 Sequence

Length
2284

1 Sequence Ontology Term

Identifier Name Description
transcript