WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50A2.2b.1 Sequence Name  C50A2.2b.1
Length (nt)  1557   Chromosome Location  IV: 1170995-1176675
Chromosome . Primary Identifier  IV Chromosome Location . Start  1170995
Chromosome Location . End  1176675 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50A2.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016796 cec-2 C50A2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50A2.2b C50A2.2b 1557   IV: 1170995-1171166

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C50A2.2b.1 1170995 1176675 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113111   172   IV: 1170995-1171166 Caenorhabditis elegans
Exon113113   56   IV: 1171562-1171617 Caenorhabditis elegans
Exon113116   486   IV: 1171793-1172278 Caenorhabditis elegans
Exon113119   269   IV: 1173174-1173442 Caenorhabditis elegans
Exon113124   334   IV: 1174637-1174970 Caenorhabditis elegans
Exon113127   240   IV: 1176436-1176675 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C50A2.2b.1 1170995 1176675 1

1 Sequence

Length
1557

1 Sequence Ontology Term

Identifier Name Description
transcript