WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C50A2.2a.1 Sequence Name  C50A2.2a.1
Length (nt)  2777   Chromosome Location  IV: 1170708-1177776
Chromosome . Primary Identifier  IV Chromosome Location . Start  1170708
Chromosome Location . End  1177776 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C50A2.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016796 cec-2 C50A2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C50A2.2a C50A2.2a 1674   IV: 1170710-1170808

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C50A2.2a.1 1170708 1177776 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113109   101   IV: 1170708-1170808 Caenorhabditis elegans
Exon113110   190   IV: 1170977-1171166 Caenorhabditis elegans
Exon113112   56   IV: 1171562-1171617 Caenorhabditis elegans
Exon113115   486   IV: 1171793-1172278 Caenorhabditis elegans
Exon113118   269   IV: 1173174-1173442 Caenorhabditis elegans
Exon113123   334   IV: 1174637-1174970 Caenorhabditis elegans
Exon113130   1341   IV: 1176436-1177776 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C50A2.2a.1 1170708 1177776 1

1 Sequence

Length
2777

1 Sequence Ontology Term

Identifier Name Description
transcript