WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AR.3a.1 Sequence Name  Y55F3AR.3a.1
Length (nt)  2358   Chromosome Location  IV: 1087108-1093920
Chromosome . Primary Identifier  IV Chromosome Location . Start  1087108
Chromosome Location . End  1093920 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AR.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021934 cct-8 Y55F3AR.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AR.3a Y55F3AR.3a 1647   IV: 1087812-1088002

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AR.3a.1 1087108 1093920 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113007   895   IV: 1087108-1088002 Caenorhabditis elegans
Exon113009   354   IV: 1088934-1089287 Caenorhabditis elegans
Exon113011   235   IV: 1089881-1090115 Caenorhabditis elegans
Exon113014   507   IV: 1091668-1092174 Caenorhabditis elegans
Exon113015   75   IV: 1093440-1093514 Caenorhabditis elegans
Exon113016   137   IV: 1093567-1093703 Caenorhabditis elegans
Exon113017   155   IV: 1093766-1093920 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AR.3a.1 1087108 1093920 -1

1 Sequence

Length
2358

1 Sequence Ontology Term

Identifier Name Description
transcript