WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AM.15.1 Sequence Name  Y55F3AM.15.1
Length (nt)  1697   Chromosome Location  IV: 1077463-1087013
Chromosome . Primary Identifier  IV Chromosome Location . Start  1077463
Chromosome Location . End  1087013 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.15.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000816 csn-4 Y55F3AM.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.15 Y55F3AM.15 1239   IV: 1077915-1078115

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.15.1 1077463 1087013 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon113001   653   IV: 1077463-1078115 Caenorhabditis elegans
Exon113002   413   IV: 1080387-1080799 Caenorhabditis elegans
Exon113003   298   IV: 1082736-1083033 Caenorhabditis elegans
Exon113004   161   IV: 1084608-1084768 Caenorhabditis elegans
Exon113005   86   IV: 1086224-1086309 Caenorhabditis elegans
Exon113006   86   IV: 1086928-1087013 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.15.1 1077463 1087013 -1

1 Sequence

Length
1697

1 Sequence Ontology Term

Identifier Name Description
transcript