WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AM.12.1 Sequence Name  Y55F3AM.12.1
Length (nt)  1452   Chromosome Location  IV: 1052524-1054794
Chromosome . Primary Identifier  IV Chromosome Location . Start  1052524
Chromosome Location . End  1054794 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021929 dcap-1 Y55F3AM.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.12 Y55F3AM.12 999   IV: 1052969-1053073

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.12.1 1052524 1054794 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112971   550   IV: 1052524-1053073 Caenorhabditis elegans
Exon112972   685   IV: 1053778-1054462 Caenorhabditis elegans
Exon112973   110   IV: 1054529-1054638 Caenorhabditis elegans
Exon112974   107   IV: 1054688-1054794 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.12.1 1052524 1054794 -1

1 Sequence

Length
1452

1 Sequence Ontology Term

Identifier Name Description
transcript