WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AM.2.1 Sequence Name  Y55F3AM.2.1
Length (nt)  1250   Chromosome Location  IV: 1045983-1049506
Chromosome . Primary Identifier  IV Chromosome Location . Start  1045983
Chromosome Location . End  1049506 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005903 srx-12 Y55F3AM.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.2 Y55F3AM.2 918   IV: 1046032-1046082

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.2.1 1045983 1049506 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112946   100   IV: 1045983-1046082 Caenorhabditis elegans
Exon112947   161   IV: 1046138-1046298 Caenorhabditis elegans
Exon112948   373   IV: 1047171-1047543 Caenorhabditis elegans
Exon112949   224   IV: 1048469-1048692 Caenorhabditis elegans
Exon112950   392   IV: 1049115-1049506 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.2.1 1045983 1049506 1

1 Sequence

Length
1250

1 Sequence Ontology Term

Identifier Name Description
transcript