Genomics
2 Transcripts
| WormMine ID | Sequence Name | Length (nt) | Chromosome Location |
|---|---|---|---|
| Transcript:Y55F3AM.19b | Y55F3AM.19b |
22
 |
IV: 1021303-1021324 |
| Transcript:Y55F3AM.19a | Y55F3AM.19a |
22
|
IV: 1021344-1021365 |
Other
10 Allele
| Public Name |
|---|
| gk963722 |
| gk964482 |
| gk963025 |
| gk963557 |
| gk963558 |
| gk964114 |
| gk964115 |
| tm5484 |
| tm5901 |
| WBVar00568357 |
1 Chromosome Location
|
Feature . Primary Identifier |
Start | End | Strand |
|---|---|---|---|
| WBGene00194825 | 1021303 | 1021365 | -1 |
1 Downstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_1019559..1021302 | 1744 | IV: 1019559-1021302 | Caenorhabditis elegans |
3 Expression Clusters
| Regulated By Treatment | Description | Algorithm | Primary Identifier |
|---|---|---|---|
| MicroRNAs that showed significantly increased expression after animals were exposed to 1 mg per liter multi-walled carbon nanotubes (MWCNTs) from L1 larva to young adult. | DESeq, cut-off of 2-fold change. | WBPaper00045019:MWCNT_upregulated | |
| Micro RNAs that showed significantly lower expression (log2fold > 2, padj < 0.01) in hermaphrodite gonad (somatic gonad plus germine) than in male gonad (somatic gonad plus germine). | DESeq2 v1.13.8, fold change > 2, FDR < 0.01. | WBPaper00056161:male_enriched_miRNA | |
| microRNAs that showed significantly increased expression in male gonad comparing to in hermaphrodite gonad. | DESeq2. miRNAs were considered significantly expressed between male and hermaphrodite if they had log2(fold change) > 1 and P-adj < 0.01. | WBPaper00067242:male_vs_hermaphrodite-gonad_upregulated |
1 Upstream Intergenic Region
| WormBase ID | Name | Sequence Name | Length (nt) | Chromosome Location | Organism |
|---|---|---|---|---|---|
| intergenic_region_chrIV_1021366..1021771 | 406 | IV: 1021366-1021771 | Caenorhabditis elegans |
