WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AM.3a.1 Sequence Name  Y55F3AM.3a.1
Length (nt)  2197   Chromosome Location  IV: 1012624-1019558
Chromosome . Primary Identifier  IV Chromosome Location . Start  1012624
Chromosome Location . End  1019558 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021921 rbm-39 Y55F3AM.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.3a Y55F3AM.3a 1743   IV: 1012788-1012850

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.3a.1 1012624 1019558 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112873   227   IV: 1012624-1012850 Caenorhabditis elegans
Exon112879   50   IV: 1012908-1012957 Caenorhabditis elegans
Exon112886   195   IV: 1013332-1013526 Caenorhabditis elegans
Exon112890   95   IV: 1014237-1014331 Caenorhabditis elegans
Exon112895   551   IV: 1015443-1015993 Caenorhabditis elegans
Exon112901   690   IV: 1017033-1017722 Caenorhabditis elegans
Exon112909   389   IV: 1019170-1019558 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.3a.1 1012624 1019558 1

1 Sequence

Length
2197

1 Sequence Ontology Term

Identifier Name Description
transcript