WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AM.5.1 Sequence Name  Y55F3AM.5.1
Length (nt)  1243   Chromosome Location  IV: 999214-1003627
Chromosome . Primary Identifier  IV Chromosome Location . Start  999214
Chromosome Location . End  1003627 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021923 Y55F3AM.5 Y55F3AM.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.5 Y55F3AM.5 1098   IV: 999230-999366

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.5.1 999214 1003627 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112842   153   IV: 999214-999366 Caenorhabditis elegans
Exon112843   133   IV: 999561-999693 Caenorhabditis elegans
Exon112844   69   IV: 1000002-1000070 Caenorhabditis elegans
Exon112845   87   IV: 1000117-1000203 Caenorhabditis elegans
Exon112846   217   IV: 1000766-1000982 Caenorhabditis elegans
Exon112847   216   IV: 1002046-1002261 Caenorhabditis elegans
Exon112848   134   IV: 1002318-1002451 Caenorhabditis elegans
Exon112849   234   IV: 1003394-1003627 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.5.1 999214 1003627 1

1 Sequence

Length
1243

1 Sequence Ontology Term

Identifier Name Description
transcript