WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AM.6a.1 Sequence Name  Y55F3AM.6a.1
Length (nt)  1258   Chromosome Location  IV: 992289-997644
Chromosome . Primary Identifier  IV Chromosome Location . Start  992289
Chromosome Location . End  997644 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002278 lep-2 Y55F3AM.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.6a Y55F3AM.6a 1242   IV: 992292-992359

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.6a.1 992289 997644 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112830   71   IV: 992289-992359 Caenorhabditis elegans
Exon112831   60   IV: 992410-992469 Caenorhabditis elegans
Exon112833   203   IV: 992579-992781 Caenorhabditis elegans
Exon112835   236   IV: 992855-993090 Caenorhabditis elegans
Exon112837   351   IV: 994278-994628 Caenorhabditis elegans
Exon112839   82   IV: 995964-996045 Caenorhabditis elegans
Exon112841   255   IV: 997390-997644 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.6a.1 992289 997644 1

1 Sequence

Length
1258

1 Sequence Ontology Term

Identifier Name Description
transcript