WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AM.7e.1 Sequence Name  Y55F3AM.7e.1
Length (nt)  1179   Chromosome Location  IV: 984424-990439
Chromosome . Primary Identifier  IV Chromosome Location . Start  984424
Chromosome Location . End  990439 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.7e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00043705 egrh-2 Y55F3AM.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.7e Y55F3AM.7e 849   IV: 984754-984819

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.7e.1 984424 990439 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112796   396   IV: 984424-984819 Caenorhabditis elegans
Exon112805   156   IV: 985668-985823 Caenorhabditis elegans
Exon112812   126   IV: 988200-988325 Caenorhabditis elegans
Exon112819   74   IV: 988383-988456 Caenorhabditis elegans
Exon112822   71   IV: 989300-989370 Caenorhabditis elegans
Exon112825   157   IV: 989421-989577 Caenorhabditis elegans
Exon112827   199   IV: 990241-990439 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.7e.1 984424 990439 -1

1 Sequence

Length
1179

1 Sequence Ontology Term

Identifier Name Description
transcript