WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3AM.7a.1 Sequence Name  Y55F3AM.7a.1
Length (nt)  1213   Chromosome Location  IV: 984393-990439
Chromosome . Primary Identifier  IV Chromosome Location . Start  984393
Chromosome Location . End  990439 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3AM.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00043705 egrh-2 Y55F3AM.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AM.7a Y55F3AM.7a 852   IV: 984754-984822

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.7a.1 984393 990439 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112795   430   IV: 984393-984822 Caenorhabditis elegans
Exon112801   156   IV: 985668-985823 Caenorhabditis elegans
Exon112808   126   IV: 988200-988325 Caenorhabditis elegans
Exon112817   74   IV: 988383-988456 Caenorhabditis elegans
Exon112820   71   IV: 989300-989370 Caenorhabditis elegans
Exon112823   157   IV: 989421-989577 Caenorhabditis elegans
Exon112826   199   IV: 990241-990439 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3AM.7a.1 984393 990439 -1

1 Sequence

Length
1213

1 Sequence Ontology Term

Identifier Name Description
transcript