WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3BR.1.1 Sequence Name  Y55F3BR.1.1
Length (nt)  2453   Chromosome Location  IV: 874791-881910
Chromosome . Primary Identifier  IV Chromosome Location . Start  874791
Chromosome Location . End  881910 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3BR.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021938 Y55F3BR.1 Y55F3BR.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3BR.1 Y55F3BR.1 2187   IV: 874982-875049

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3BR.1.1 874791 881910 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112582   259   IV: 874791-875049 Caenorhabditis elegans
Exon112583   64   IV: 875128-875191 Caenorhabditis elegans
Exon112584   334   IV: 875239-875572 Caenorhabditis elegans
Exon112585   475   IV: 876882-877356 Caenorhabditis elegans
Exon112588   256   IV: 878255-878510 Caenorhabditis elegans
Exon112589   388   IV: 879478-879865 Caenorhabditis elegans
Exon112590   144   IV: 880456-880599 Caenorhabditis elegans
Exon112591   212   IV: 880967-881178 Caenorhabditis elegans
Exon112592   321   IV: 881590-881910 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3BR.1.1 874791 881910 1

1 Sequence

Length
2453

1 Sequence Ontology Term

Identifier Name Description
transcript