WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3BR.2c.1 Sequence Name  Y55F3BR.2c.1
Length (nt)  2307   Chromosome Location  IV: 868675-874529
Chromosome . Primary Identifier  IV Chromosome Location . Start  868675
Chromosome Location . End  874529 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3BR.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021939 Y55F3BR.2 Y55F3BR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3BR.2c Y55F3BR.2c 2307   IV: 868675-869242

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3BR.2c.1 868675 874529 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112563   568   IV: 868675-869242 Caenorhabditis elegans
Exon112566   504   IV: 870182-870685 Caenorhabditis elegans
Exon112569   150   IV: 871564-871713 Caenorhabditis elegans
Exon112572   121   IV: 871831-871951 Caenorhabditis elegans
Exon112575   662   IV: 872494-873155 Caenorhabditis elegans
Exon112578   246   IV: 873857-874102 Caenorhabditis elegans
Exon112580   56   IV: 874474-874529 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3BR.2c.1 868675 874529 1

1 Sequence

Length
2307

1 Sequence Ontology Term

Identifier Name Description
transcript