WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3BR.2b.1 Sequence Name  Y55F3BR.2b.1
Length (nt)  3771   Chromosome Location  IV: 862180-874529
Chromosome . Primary Identifier  IV Chromosome Location . Start  862180
Chromosome Location . End  874529 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3BR.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021939 Y55F3BR.2 Y55F3BR.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3BR.2b Y55F3BR.2b 3771   IV: 862180-862402

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3BR.2b.1 862180 874529 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112541   223   IV: 862180-862402 Caenorhabditis elegans
Exon112544   153   IV: 863222-863374 Caenorhabditis elegans
Exon112546   240   IV: 864027-864266 Caenorhabditis elegans
Exon112548   126   IV: 864934-865059 Caenorhabditis elegans
Exon112550   174   IV: 865734-865907 Caenorhabditis elegans
Exon112552   233   IV: 866063-866295 Caenorhabditis elegans
Exon112554   91   IV: 866540-866630 Caenorhabditis elegans
Exon112556   141   IV: 866684-866824 Caenorhabditis elegans
Exon112558   70   IV: 866874-866943 Caenorhabditis elegans
Exon112562   581   IV: 868662-869242 Caenorhabditis elegans
Exon112565   504   IV: 870182-870685 Caenorhabditis elegans
Exon112568   150   IV: 871564-871713 Caenorhabditis elegans
Exon112571   121   IV: 871831-871951 Caenorhabditis elegans
Exon112574   662   IV: 872494-873155 Caenorhabditis elegans
Exon112577   246   IV: 873857-874102 Caenorhabditis elegans
Exon112579   56   IV: 874474-874529 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3BR.2b.1 862180 874529 1

1 Sequence

Length
3771

1 Sequence Ontology Term

Identifier Name Description
transcript