WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3BR.4b.1 Sequence Name  Y55F3BR.4b.1
Length (nt)  1388   Chromosome Location  IV: 845498-848872
Chromosome . Primary Identifier  IV Chromosome Location . Start  845498
Chromosome Location . End  848872 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3BR.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021941 lgc-33 Y55F3BR.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3BR.4b Y55F3BR.4b 1197   IV: 845881-846126

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3BR.4b.1 845498 848872 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112505   135   IV: 845498-845632 Caenorhabditis elegans
Exon112507   280   IV: 845847-846126 Caenorhabditis elegans
Exon112509   358   IV: 846399-846756 Caenorhabditis elegans
Exon112511   176   IV: 847632-847807 Caenorhabditis elegans
Exon112513   187   IV: 847857-848043 Caenorhabditis elegans
Exon112515   101   IV: 848256-848356 Caenorhabditis elegans
Exon112517   151   IV: 848722-848872 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3BR.4b.1 845498 848872 1

1 Sequence

Length
1388

1 Sequence Ontology Term

Identifier Name Description
transcript