WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y55F3BR.6a Sequence Name  Y55F3BR.6a
Length (nt)  543   Chromosome Location  IV: 835777-836031
Chromosome . Primary Identifier  IV Chromosome Location . Start  835777
Chromosome Location . End  836031
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3BR.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39864 Y55F3BR.6, isoform a 19.5 180 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00057548
WBRNAi00106391
WBRNAi00021041
WBRNAi00076829
WBRNAi00037528

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y55F3BR.6a 835777 836031 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021943 Y55F3BR.6 Y55F3BR.6 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y55F3BR.6a 835777 836031 -1
CDS:Y55F3BR.6a 836936 837103 -1
CDS:Y55F3BR.6a 837405 837473 -1
CDS:Y55F3BR.6a 838420 838470 -1

1 Sequence

Length
543

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y55F3BR.6a.2 Y55F3BR.6a.2 1572   IV: 835033-842126
Transcript:Y55F3BR.6a.3 Y55F3BR.6a.3 1308   IV: 835033-838491
Transcript:Y55F3BR.6a.1 Y55F3BR.6a.1 1514   IV: 835033-842126