WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3BR.5a.1 Sequence Name  Y55F3BR.5a.1
Length (nt)  804   Chromosome Location  IV: 830358-831896
Chromosome . Primary Identifier  IV Chromosome Location . Start  830358
Chromosome Location . End  831896 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3BR.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021942 madf-1 Y55F3BR.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3BR.5a Y55F3BR.5a 771   IV: 830391-830620

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3BR.5a.1 830358 831896 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112468   263   IV: 830358-830620 Caenorhabditis elegans
Exon112472   231   IV: 830677-830907 Caenorhabditis elegans
Exon112474   154   IV: 831476-831629 Caenorhabditis elegans
Exon112476   114   IV: 831691-831804 Caenorhabditis elegans
Exon112478   42   IV: 831855-831896 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3BR.5a.1 830358 831896 -1

1 Sequence

Length
804

1 Sequence Ontology Term

Identifier Name Description
transcript