WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3BL.2a.1 Sequence Name  Y55F3BL.2a.1
Length (nt)  2531   Chromosome Location  IV: 807398-824954
Chromosome . Primary Identifier  IV Chromosome Location . Start  807398
Chromosome Location . End  824954 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3BL.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021936 zipt-15 Y55F3BL.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3BL.2a Y55F3BL.2a 1242   IV: 808674-808823

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3BL.2a.1 807398 824954 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112448   1426   IV: 807398-808823 Caenorhabditis elegans
Exon112450   104   IV: 809646-809749 Caenorhabditis elegans
Exon112452   87   IV: 809817-809903 Caenorhabditis elegans
Exon112454   208   IV: 811529-811736 Caenorhabditis elegans
Exon112456   81   IV: 817299-817379 Caenorhabditis elegans
Exon112458   132   IV: 821331-821462 Caenorhabditis elegans
Exon112461   144   IV: 822088-822231 Caenorhabditis elegans
Exon112462   72   IV: 823511-823582 Caenorhabditis elegans
Exon112463   98   IV: 823652-823749 Caenorhabditis elegans
Exon112464   179   IV: 824776-824954 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3BL.2a.1 807398 824954 -1

1 Sequence

Length
2531

1 Sequence Ontology Term

Identifier Name Description
transcript