WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3C.3d.1 Sequence Name  Y55F3C.3d.1
Length (nt)  1614   Chromosome Location  IV: 748707-752928
Chromosome . Primary Identifier  IV Chromosome Location . Start  748707
Chromosome Location . End  752928 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3C.3d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021948 kvs-5 Y55F3C.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3C.3d Y55F3C.3d 1614   IV: 748707-748738

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3C.3d.1 748707 752928 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112273   32   IV: 748707-748738 Caenorhabditis elegans
Exon112279   102   IV: 748813-748914 Caenorhabditis elegans
Exon112285   170   IV: 748969-749138 Caenorhabditis elegans
Exon112291   94   IV: 749514-749607 Caenorhabditis elegans
Exon112297   181   IV: 749791-749971 Caenorhabditis elegans
Exon112302   24   IV: 750037-750060 Caenorhabditis elegans
Exon112306   93   IV: 750200-750292 Caenorhabditis elegans
Exon112312   201   IV: 751088-751288 Caenorhabditis elegans
Exon112318   54   IV: 751381-751434 Caenorhabditis elegans
Exon112322   102   IV: 751583-751684 Caenorhabditis elegans
Exon112328   193   IV: 751872-752064 Caenorhabditis elegans
Exon112334   163   IV: 752115-752277 Caenorhabditis elegans
Exon112340   127   IV: 752679-752805 Caenorhabditis elegans
Exon112345   78   IV: 752851-752928 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3C.3d.1 748707 752928 1

1 Sequence

Length
1614

1 Sequence Ontology Term

Identifier Name Description
transcript