WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3C.3a.1 Sequence Name  Y55F3C.3a.1
Length (nt)  1954   Chromosome Location  IV: 742310-753316
Chromosome . Primary Identifier  IV Chromosome Location . Start  742310
Chromosome Location . End  753316 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3C.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021948 kvs-5 Y55F3C.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3C.3a Y55F3C.3a 1566   IV: 742310-742317

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3C.3a.1 742310 753316 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112271   8   IV: 742310-742317 Caenorhabditis elegans
Exon112277   102   IV: 748813-748914 Caenorhabditis elegans
Exon112283   170   IV: 748969-749138 Caenorhabditis elegans
Exon112289   94   IV: 749514-749607 Caenorhabditis elegans
Exon112295   181   IV: 749791-749971 Caenorhabditis elegans
Exon112304   93   IV: 750200-750292 Caenorhabditis elegans
Exon112310   201   IV: 751088-751288 Caenorhabditis elegans
Exon112316   54   IV: 751381-751434 Caenorhabditis elegans
Exon112320   102   IV: 751583-751684 Caenorhabditis elegans
Exon112326   193   IV: 751872-752064 Caenorhabditis elegans
Exon112332   163   IV: 752115-752277 Caenorhabditis elegans
Exon112338   127   IV: 752679-752805 Caenorhabditis elegans
Exon112349   466   IV: 752851-753316 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y55F3C.3a.1 742310 753316 1

1 Sequence

Length
1954

1 Sequence Ontology Term

Identifier Name Description
transcript