WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y55F3C.3c.1 Sequence Name  Y55F3C.3c.1
Length (nt)  1803   Chromosome Location  IV: 736747-752928
Chromosome . Primary Identifier  IV Chromosome Location . Start  736747
Chromosome Location . End  752928 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y55F3C.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021948 kvs-5 Y55F3C.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3C.3c Y55F3C.3c 1803   IV: 736747-736840

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3C.3c.1 736747 752928 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon112269   94   IV: 736747-736840 Caenorhabditis elegans
Exon112270   127   IV: 737997-738123 Caenorhabditis elegans
Exon112278   102   IV: 748813-748914 Caenorhabditis elegans
Exon112284   170   IV: 748969-749138 Caenorhabditis elegans
Exon112290   94   IV: 749514-749607 Caenorhabditis elegans
Exon112296   181   IV: 749791-749971 Caenorhabditis elegans
Exon112301   24   IV: 750037-750060 Caenorhabditis elegans
Exon112305   93   IV: 750200-750292 Caenorhabditis elegans
Exon112311   201   IV: 751088-751288 Caenorhabditis elegans
Exon112317   54   IV: 751381-751434 Caenorhabditis elegans
Exon112321   102   IV: 751583-751684 Caenorhabditis elegans
Exon112327   193   IV: 751872-752064 Caenorhabditis elegans
Exon112333   163   IV: 752115-752277 Caenorhabditis elegans
Exon112339   127   IV: 752679-752805 Caenorhabditis elegans
Exon112344   78   IV: 752851-752928 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y55F3C.3c.1 736747 752928 1

1 Sequence

Length
1803

1 Sequence Ontology Term

Identifier Name Description
transcript