WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F56A11.1.1 Sequence Name  F56A11.1.1
Length (nt)  4022   Chromosome Location  IV: 572769-583577
Chromosome . Primary Identifier  IV Chromosome Location . Start  572769
Chromosome Location . End  583577 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F56A11.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001579 gex-2 F56A11.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F56A11.1 F56A11.1 3789   IV: 572776-572820

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F56A11.1.1 572769 583577 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon111949   52   IV: 572769-572820 Caenorhabditis elegans
Exon111950   71   IV: 572868-572938 Caenorhabditis elegans
Exon111951   91   IV: 572988-573078 Caenorhabditis elegans
Exon111952   180   IV: 573134-573313 Caenorhabditis elegans
Exon111953   182   IV: 576048-576229 Caenorhabditis elegans
Exon111954   121   IV: 576288-576408 Caenorhabditis elegans
Exon111955   319   IV: 576975-577293 Caenorhabditis elegans
Exon111956   2115   IV: 577536-579650 Caenorhabditis elegans
Exon111957   212   IV: 579863-580074 Caenorhabditis elegans
Exon111958   131   IV: 580138-580268 Caenorhabditis elegans
Exon111965   148   IV: 582335-582482 Caenorhabditis elegans
Exon111966   400   IV: 583178-583577 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F56A11.1.1 572769 583577 1

1 Sequence

Length
4022

1 Sequence Ontology Term

Identifier Name Description
transcript