WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AA.1a.1 Sequence Name  Y38C1AA.1a.1
Length (nt)  1572   Chromosome Location  IV: 208189-217391
Chromosome . Primary Identifier  IV Chromosome Location . Start  208189
Chromosome Location . End  217391 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AA.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021394 Y38C1AA.1 Y38C1AA.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AA.1a Y38C1AA.1a 1164   IV: 208208-208241

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AA.1a.1 208189 217391 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110661   53   IV: 208189-208241 Caenorhabditis elegans
Exon110662   95   IV: 208728-208822 Caenorhabditis elegans
Exon110666   202   IV: 211747-211948 Caenorhabditis elegans
Exon110670   560   IV: 213410-213969 Caenorhabditis elegans
Exon110674   141   IV: 215165-215305 Caenorhabditis elegans
Exon110678   521   IV: 216871-217391 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AA.1a.1 208189 217391 1

1 Sequence

Length
1572

1 Sequence Ontology Term

Identifier Name Description
transcript