WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AA.2.1 Sequence Name  Y38C1AA.2.1
Length (nt)  1687   Chromosome Location  IV: 194742-202586
Chromosome . Primary Identifier  IV Chromosome Location . Start  194742
Chromosome Location . End  202586 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AA.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000815 csn-3 Y38C1AA.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AA.2 Y38C1AA.2 1506   IV: 194778-194784

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AA.2.1 194742 202586 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110644   43   IV: 194742-194784 Caenorhabditis elegans
Exon110645   126   IV: 194841-194966 Caenorhabditis elegans
Exon110646   270   IV: 196840-197109 Caenorhabditis elegans
Exon110647   311   IV: 197761-198071 Caenorhabditis elegans
Exon110648   197   IV: 199115-199311 Caenorhabditis elegans
Exon110649   456   IV: 200838-201293 Caenorhabditis elegans
Exon110650   284   IV: 202303-202586 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AA.2.1 194742 202586 1

1 Sequence

Length
1687

1 Sequence Ontology Term

Identifier Name Description
transcript