WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AA.12b.1 Sequence Name  Y38C1AA.12b.1
Length (nt)  1621   Chromosome Location  IV: 192293-194745
Chromosome . Primary Identifier  IV Chromosome Location . Start  192293
Chromosome Location . End  194745 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AA.12b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021402 intk-1 Y38C1AA.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AA.12b Y38C1AA.12b 594   IV: 192482-192577

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AA.12b.1 192293 194745 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110637   285   IV: 192293-192577 Caenorhabditis elegans
Exon110639   105   IV: 192627-192731 Caenorhabditis elegans
Exon110640   379   IV: 192777-193155 Caenorhabditis elegans
Exon110643   852   IV: 193894-194745 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AA.12b.1 192293 194745 1

1 Sequence

Length
1621

1 Sequence Ontology Term

Identifier Name Description
transcript