WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AA.3a.1 Sequence Name  Y38C1AA.3a.1
Length (nt)  1246   Chromosome Location  IV: 184484-192151
Chromosome . Primary Identifier  IV Chromosome Location . Start  184484
Chromosome Location . End  192151 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AA.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021395 pnc-1 Y38C1AA.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AA.3a Y38C1AA.3a 1008   IV: 184650-184709

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AA.3a.1 184484 192151 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110624   226   IV: 184484-184709 Caenorhabditis elegans
Exon110627   144   IV: 189486-189629 Caenorhabditis elegans
Exon110630   609   IV: 190642-191250 Caenorhabditis elegans
Exon110635   267   IV: 191885-192151 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AA.3a.1 184484 192151 1

1 Sequence

Length
1246

1 Sequence Ontology Term

Identifier Name Description
transcript