WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AA.4a.1 Sequence Name  Y38C1AA.4a.1
Length (nt)  1648   Chromosome Location  IV: 179083-183254
Chromosome . Primary Identifier  IV Chromosome Location . Start  179083
Chromosome Location . End  183254 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AA.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006561 tcl-2 Y38C1AA.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AA.4a Y38C1AA.4a 1308   IV: 179083-179119

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AA.4a.1 179083 183254 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110615   37   IV: 179083-179119 Caenorhabditis elegans
Exon110616   480   IV: 179717-180196 Caenorhabditis elegans
Exon110618   125   IV: 180406-180530 Caenorhabditis elegans
Exon110620   459   IV: 180866-181324 Caenorhabditis elegans
Exon110623   547   IV: 182708-183254 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AA.4a.1 179083 183254 1

1 Sequence

Length
1648

1 Sequence Ontology Term

Identifier Name Description
transcript