WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F29C4.8l.1 Sequence Name  F29C4.8l.1
Length (nt)  2136   Chromosome Location  IV: 138699-147919
Chromosome . Primary Identifier  IV Chromosome Location . Start  138699
Chromosome Location . End  147919 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F29C4.8l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000674 col-99 F29C4.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F29C4.8l F29C4.8l 2136   IV: 138699-138855

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F29C4.8l.1 138699 147919 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110309   157   IV: 138699-138855 Caenorhabditis elegans
Exon110324   23   IV: 139236-139258 Caenorhabditis elegans
Exon110341   162   IV: 139335-139496 Caenorhabditis elegans
Exon110354   45   IV: 139551-139595 Caenorhabditis elegans
Exon110367   183   IV: 139730-139912 Caenorhabditis elegans
Exon110384   117   IV: 139954-140070 Caenorhabditis elegans
Exon110401   159   IV: 140142-140300 Caenorhabditis elegans
Exon110427   156   IV: 140543-140698 Caenorhabditis elegans
Exon110444   177   IV: 140805-140981 Caenorhabditis elegans
Exon110461   351   IV: 141068-141418 Caenorhabditis elegans
Exon110473   36   IV: 141715-141750 Caenorhabditis elegans
Exon110487   36   IV: 142260-142295 Caenorhabditis elegans
Exon110504   108   IV: 142441-142548 Caenorhabditis elegans
Exon110521   57   IV: 142602-142658 Caenorhabditis elegans
Exon110539   35   IV: 143757-143791 Caenorhabditis elegans
Exon110558   91   IV: 144796-144886 Caenorhabditis elegans
Exon110576   243   IV: 147677-147919 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F29C4.8l.1 138699 147919 -1

1 Sequence

Length
2136

1 Sequence Ontology Term

Identifier Name Description
transcript