WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0545.1b.3 Sequence Name  B0545.1b.3
Length (nt)  2343   Chromosome Location  IV: 103926-110754
Chromosome . Primary Identifier  IV Chromosome Location . Start  103926
Chromosome Location . End  110754 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0545.1b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006599 tpa-1 B0545.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0545.1b B0545.1b 1704   IV: 103962-104007

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0545.1b.3 103926 110754 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110227   82   IV: 103926-104007 Caenorhabditis elegans
Exon110234   221   IV: 104051-104271 Caenorhabditis elegans
Exon110238   130   IV: 105006-105135 Caenorhabditis elegans
Exon110242   530   IV: 105652-106181 Caenorhabditis elegans
Exon110246   155   IV: 107229-107383 Caenorhabditis elegans
Exon110250   472   IV: 107816-108287 Caenorhabditis elegans
Exon110254   753   IV: 110002-110754 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0545.1b.3 103926 110754 1

1 Sequence

Length
2343

1 Sequence Ontology Term

Identifier Name Description
transcript