WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0545.1a.1 Sequence Name  B0545.1a.1
Length (nt)  2855   Chromosome Location  IV: 91980-110819
Chromosome . Primary Identifier  IV Chromosome Location . Start  91980
Chromosome Location . End  110819 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0545.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006599 tpa-1 B0545.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0545.1a B0545.1a 2115   IV: 92052-92077

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:B0545.1a.1 91980 110819 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110215   98   IV: 91980-92077 Caenorhabditis elegans
Exon110219   107   IV: 92804-92910 Caenorhabditis elegans
Exon110221   146   IV: 93685-93830 Caenorhabditis elegans
Exon110224   103   IV: 98788-98890 Caenorhabditis elegans
Exon110228   75   IV: 103933-104007 Caenorhabditis elegans
Exon110231   221   IV: 104051-104271 Caenorhabditis elegans
Exon110235   130   IV: 105006-105135 Caenorhabditis elegans
Exon110239   530   IV: 105652-106181 Caenorhabditis elegans
Exon110243   155   IV: 107229-107383 Caenorhabditis elegans
Exon110247   472   IV: 107816-108287 Caenorhabditis elegans
Exon110255   818   IV: 110002-110819 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:B0545.1a.1 91980 110819 1

1 Sequence

Length
2855

1 Sequence Ontology Term

Identifier Name Description
transcript