WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0545.1b.1 Sequence Name  B0545.1b.1
Length (nt)  2816   Chromosome Location  IV: 91980-110750
Chromosome . Primary Identifier  IV Chromosome Location . Start  91980
Chromosome Location . End  110750 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0545.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006599 tpa-1 B0545.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0545.1b B0545.1b 1704   IV: 103962-104007

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0545.1b.1 91980 110750 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110216   98   IV: 91980-92077 Caenorhabditis elegans
Exon110217   30   IV: 92622-92651 Caenorhabditis elegans
Exon110220   107   IV: 92804-92910 Caenorhabditis elegans
Exon110222   146   IV: 93685-93830 Caenorhabditis elegans
Exon110225   103   IV: 98788-98890 Caenorhabditis elegans
Exon110229   75   IV: 103933-104007 Caenorhabditis elegans
Exon110232   221   IV: 104051-104271 Caenorhabditis elegans
Exon110236   130   IV: 105006-105135 Caenorhabditis elegans
Exon110240   530   IV: 105652-106181 Caenorhabditis elegans
Exon110244   155   IV: 107229-107383 Caenorhabditis elegans
Exon110248   472   IV: 107816-108287 Caenorhabditis elegans
Exon110253   749   IV: 110002-110750 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0545.1b.1 91980 110750 1

1 Sequence

Length
2816

1 Sequence Ontology Term

Identifier Name Description
transcript