WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AB.8c.1 Sequence Name  Y38C1AB.8c.1
Length (nt)  4704   Chromosome Location  IV: 32953-48844
Chromosome . Primary Identifier  IV Chromosome Location . Start  32953
Chromosome Location . End  48844 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AB.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001492 frm-5.1 Y38C1AB.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AB.8c Y38C1AB.8c 4704   IV: 32953-33173

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AB.8c.1 32953 48844 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110075   221   IV: 32953-33173 Caenorhabditis elegans
Exon110078   331   IV: 33845-34175 Caenorhabditis elegans
Exon110084   159   IV: 34536-34694 Caenorhabditis elegans
Exon110090   329   IV: 35082-35410 Caenorhabditis elegans
Exon110096   154   IV: 36458-36611 Caenorhabditis elegans
Exon110107   197   IV: 39331-39527 Caenorhabditis elegans
Exon110113   180   IV: 39749-39928 Caenorhabditis elegans
Exon110119   152   IV: 40023-40174 Caenorhabditis elegans
Exon110125   143   IV: 40425-40567 Caenorhabditis elegans
Exon110130   42   IV: 40844-40885 Caenorhabditis elegans
Exon110134   445   IV: 41176-41620 Caenorhabditis elegans
Exon110141   323   IV: 42095-42417 Caenorhabditis elegans
Exon110147   75   IV: 42659-42733 Caenorhabditis elegans
Exon110155   137   IV: 42834-42970 Caenorhabditis elegans
Exon110159   76   IV: 45106-45181 Caenorhabditis elegans
Exon110163   603   IV: 45652-46254 Caenorhabditis elegans
Exon110167   223   IV: 46378-46600 Caenorhabditis elegans
Exon110171   422   IV: 46814-47235 Caenorhabditis elegans
Exon110175   82   IV: 47791-47872 Caenorhabditis elegans
Exon110179   227   IV: 48276-48502 Caenorhabditis elegans
Exon110183   135   IV: 48559-48693 Caenorhabditis elegans
Exon110185   48   IV: 48797-48844 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AB.8c.1 32953 48844 -1

1 Sequence

Length
4704

1 Sequence Ontology Term

Identifier Name Description
transcript