WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AB.8f.1 Sequence Name  Y38C1AB.8f.1
Length (nt)  2727   Chromosome Location  IV: 32953-42851
Chromosome . Primary Identifier  IV Chromosome Location . Start  32953
Chromosome Location . End  42851 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AB.8f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001492 frm-5.1 Y38C1AB.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AB.8f Y38C1AB.8f 2727   IV: 32953-33173

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AB.8f.1 32953 42851 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110074   221   IV: 32953-33173 Caenorhabditis elegans
Exon110081   331   IV: 33845-34175 Caenorhabditis elegans
Exon110087   159   IV: 34536-34694 Caenorhabditis elegans
Exon110093   329   IV: 35082-35410 Caenorhabditis elegans
Exon110099   154   IV: 36458-36611 Caenorhabditis elegans
Exon110110   197   IV: 39331-39527 Caenorhabditis elegans
Exon110116   180   IV: 39749-39928 Caenorhabditis elegans
Exon110122   152   IV: 40023-40174 Caenorhabditis elegans
Exon110128   143   IV: 40425-40567 Caenorhabditis elegans
Exon110137   445   IV: 41176-41620 Caenorhabditis elegans
Exon110144   323   IV: 42095-42417 Caenorhabditis elegans
Exon110150   75   IV: 42659-42733 Caenorhabditis elegans
Exon110152   18   IV: 42834-42851 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AB.8f.1 32953 42851 -1

1 Sequence

Length
2727

1 Sequence Ontology Term

Identifier Name Description
transcript