WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AB.2.1 Sequence Name  Y38C1AB.2.1
Length (nt)  2373   Chromosome Location  IV: 26982-32380
Chromosome . Primary Identifier  IV Chromosome Location . Start  26982
Chromosome Location . End  32380 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AB.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021404 trpl-3 Y38C1AB.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AB.2 Y38C1AB.2 2373   IV: 26982-27131

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38C1AB.2.1 26982 32380 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110058   150   IV: 26982-27131 Caenorhabditis elegans
Exon110059   94   IV: 27181-27274 Caenorhabditis elegans
Exon110060   115   IV: 27321-27435 Caenorhabditis elegans
Exon110061   153   IV: 27557-27709 Caenorhabditis elegans
Exon110062   214   IV: 27756-27969 Caenorhabditis elegans
Exon110063   84   IV: 28247-28330 Caenorhabditis elegans
Exon110064   177   IV: 28501-28677 Caenorhabditis elegans
Exon110065   303   IV: 29041-29343 Caenorhabditis elegans
Exon110066   79   IV: 29639-29717 Caenorhabditis elegans
Exon110067   265   IV: 29765-30029 Caenorhabditis elegans
Exon110068   72   IV: 30075-30146 Caenorhabditis elegans
Exon110069   667   IV: 31714-32380 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38C1AB.2.1 26982 32380 1

1 Sequence

Length
2373

1 Sequence Ontology Term

Identifier Name Description
transcript