WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AB.6.1 Sequence Name  Y38C1AB.6.1
Length (nt)  2373   Chromosome Location  IV: 15499-20899
Chromosome . Primary Identifier  IV Chromosome Location . Start  15499
Chromosome Location . End  20899 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AB.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021408 trpl-4 Y38C1AB.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AB.6 Y38C1AB.6 2373   IV: 15499-16165

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38C1AB.6.1 15499 20899 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon110032   667   IV: 15499-16165 Caenorhabditis elegans
Exon110033   72   IV: 17735-17806 Caenorhabditis elegans
Exon110034   265   IV: 17852-18116 Caenorhabditis elegans
Exon110035   79   IV: 18164-18242 Caenorhabditis elegans
Exon110036   303   IV: 18538-18840 Caenorhabditis elegans
Exon110037   177   IV: 19204-19380 Caenorhabditis elegans
Exon110038   84   IV: 19551-19634 Caenorhabditis elegans
Exon110039   214   IV: 19912-20125 Caenorhabditis elegans
Exon110040   153   IV: 20172-20324 Caenorhabditis elegans
Exon110041   115   IV: 20446-20560 Caenorhabditis elegans
Exon110042   94   IV: 20607-20700 Caenorhabditis elegans
Exon110043   150   IV: 20750-20899 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38C1AB.6.1 15499 20899 -1

1 Sequence

Length
2373

1 Sequence Ontology Term

Identifier Name Description
transcript