WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AB.4a.1 Sequence Name  Y38C1AB.4a.1
Length (nt)  4565   Chromosome Location  IV: 695-15330
Chromosome . Primary Identifier  IV Chromosome Location . Start  695
Chromosome Location . End  15330 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AB.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021406 frm-5.2 Y38C1AB.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AB.4a Y38C1AB.4a 4161   IV: 695-1065

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AB.4a.1 695 15330 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109960   371   IV: 695-1065 Caenorhabditis elegans
Exon109961   223   IV: 1279-1501 Caenorhabditis elegans
Exon109965   603   IV: 1625-2227 Caenorhabditis elegans
Exon109969   76   IV: 2698-2773 Caenorhabditis elegans
Exon109973   137   IV: 4909-5045 Caenorhabditis elegans
Exon109977   75   IV: 5146-5220 Caenorhabditis elegans
Exon109981   323   IV: 5462-5784 Caenorhabditis elegans
Exon109985   445   IV: 6259-6703 Caenorhabditis elegans
Exon109989   42   IV: 6994-7035 Caenorhabditis elegans
Exon109991   143   IV: 7312-7454 Caenorhabditis elegans
Exon109995   152   IV: 7705-7856 Caenorhabditis elegans
Exon109999   180   IV: 7951-8130 Caenorhabditis elegans
Exon110003   197   IV: 8352-8548 Caenorhabditis elegans
Exon110012   154   IV: 11268-11421 Caenorhabditis elegans
Exon110016   329   IV: 12469-12797 Caenorhabditis elegans
Exon110020   159   IV: 13185-13343 Caenorhabditis elegans
Exon110024   331   IV: 13704-14034 Caenorhabditis elegans
Exon110028   625   IV: 14706-15330 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y38C1AB.4a.1 695 15330 1

1 Sequence

Length
4565

1 Sequence Ontology Term

Identifier Name Description
transcript