WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y38C1AB.4b.1 Sequence Name  Y38C1AB.4b.1
Length (nt)  4663   Chromosome Location  IV: 641-15416
Chromosome . Primary Identifier  IV Chromosome Location . Start  641
Chromosome Location . End  15416 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38C1AB.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021406 frm-5.2 Y38C1AB.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y38C1AB.4b Y38C1AB.4b 4119   IV: 695-1065

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y38C1AB.4b.1 641 15416 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109959   425   IV: 641-1065 Caenorhabditis elegans
Exon109962   223   IV: 1279-1501 Caenorhabditis elegans
Exon109966   603   IV: 1625-2227 Caenorhabditis elegans
Exon109970   76   IV: 2698-2773 Caenorhabditis elegans
Exon109974   137   IV: 4909-5045 Caenorhabditis elegans
Exon109978   75   IV: 5146-5220 Caenorhabditis elegans
Exon109982   323   IV: 5462-5784 Caenorhabditis elegans
Exon109986   445   IV: 6259-6703 Caenorhabditis elegans
Exon109992   143   IV: 7312-7454 Caenorhabditis elegans
Exon109996   152   IV: 7705-7856 Caenorhabditis elegans
Exon110000   180   IV: 7951-8130 Caenorhabditis elegans
Exon110004   197   IV: 8352-8548 Caenorhabditis elegans
Exon110013   154   IV: 11268-11421 Caenorhabditis elegans
Exon110017   329   IV: 12469-12797 Caenorhabditis elegans
Exon110021   159   IV: 13185-13343 Caenorhabditis elegans
Exon110025   331   IV: 13704-14034 Caenorhabditis elegans
Exon110031   711   IV: 14706-15416 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y38C1AB.4b.1 641 15416 1

1 Sequence

Length
4663

1 Sequence Ontology Term

Identifier Name Description
transcript