WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K08E3.3a.1 Sequence Name  K08E3.3a.1
Length (nt)  2027   Chromosome Location  III: 13755896-13759445
Chromosome . Primary Identifier  III Chromosome Location . Start  13755896
Chromosome Location . End  13759445 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K08E3.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010663 toca-2 K08E3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08E3.3a K08E3.3a 1827   III: 13755999-13756031

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K08E3.3a.1 13755896 13759445 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109823   136   III: 13755896-13756031 Caenorhabditis elegans
Exon109825   116   III: 13756074-13756189 Caenorhabditis elegans
Exon109827   124   III: 13756239-13756362 Caenorhabditis elegans
Exon109829   161   III: 13756411-13756571 Caenorhabditis elegans
Exon109831   106   III: 13756619-13756724 Caenorhabditis elegans
Exon109833   205   III: 13756772-13756976 Caenorhabditis elegans
Exon109835   82   III: 13757022-13757103 Caenorhabditis elegans
Exon109837   77   III: 13757150-13757226 Caenorhabditis elegans
Exon109839   250   III: 13757373-13757622 Caenorhabditis elegans
Exon109841   152   III: 13757918-13758069 Caenorhabditis elegans
Exon109843   107   III: 13758204-13758310 Caenorhabditis elegans
Exon109845   51   III: 13758359-13758409 Caenorhabditis elegans
Exon109847   130   III: 13758854-13758983 Caenorhabditis elegans
Exon109849   175   III: 13759067-13759241 Caenorhabditis elegans
Exon109852   155   III: 13759291-13759445 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K08E3.3a.1 13755896 13759445 1

1 Sequence

Length
2027

1 Sequence Ontology Term

Identifier Name Description
transcript