WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25C8.1.1 Sequence Name  T25C8.1.1
Length (nt)  1440   Chromosome Location  III: 13608020-13614799
Chromosome . Primary Identifier  III Chromosome Location . Start  13608020
Chromosome Location . End  13614799 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25C8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012017 shpk-1 T25C8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25C8.1 T25C8.1 1293   III: 13608072-13608145

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T25C8.1.1 13608020 13614799 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon109527   126   III: 13608020-13608145 Caenorhabditis elegans
Exon109528   103   III: 13608530-13608632 Caenorhabditis elegans
Exon109529   112   III: 13608676-13608787 Caenorhabditis elegans
Exon109530   161   III: 13608877-13609037 Caenorhabditis elegans
Exon109531   283   III: 13609196-13609478 Caenorhabditis elegans
Exon109532   167   III: 13609534-13609700 Caenorhabditis elegans
Exon109533   67   III: 13614070-13614136 Caenorhabditis elegans
Exon109534   421   III: 13614379-13614799 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T25C8.1.1 13608020 13614799 1

1 Sequence

Length
1440

1 Sequence Ontology Term

Identifier Name Description
transcript