WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53A2.8a.1 Sequence Name  F53A2.8a.1
Length (nt)  2274   Chromosome Location  III: 13347085-13355683
Chromosome . Primary Identifier  III Chromosome Location . Start  13347085
Chromosome Location . End  13355683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53A2.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003478 mtm-6 F53A2.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53A2.8a F53A2.8a 2031   III: 13347105-13347134

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F53A2.8a.1 13347085 13355683 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108915   50   III: 13347085-13347134 Caenorhabditis elegans
Exon108918   204   III: 13352068-13352271 Caenorhabditis elegans
Exon108921   76   III: 13352329-13352404 Caenorhabditis elegans
Exon108924   947   III: 13352616-13353562 Caenorhabditis elegans
Exon108927   90   III: 13354093-13354182 Caenorhabditis elegans
Exon108930   84   III: 13354441-13354524 Caenorhabditis elegans
Exon108933   525   III: 13354813-13355337 Caenorhabditis elegans
Exon108936   298   III: 13355386-13355683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F53A2.8a.1 13347085 13355683 1

1 Sequence

Length
2274

1 Sequence Ontology Term

Identifier Name Description
transcript