WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39E4B.12a.1 Sequence Name  Y39E4B.12a.1
Length (nt)  2408   Chromosome Location  III: 13187392-13204895
Chromosome . Primary Identifier  III Chromosome Location . Start  13187392
Chromosome Location . End  13204895 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001630 gly-5 Y39E4B.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39E4B.12a Y39E4B.12a 1881   III: 13188136-13188243

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y39E4B.12a.1 13187392 13204895 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108583   59   III: 13187392-13187450 Caenorhabditis elegans
Exon108588   134   III: 13188110-13188243 Caenorhabditis elegans
Exon108591   264   III: 13188299-13188562 Caenorhabditis elegans
Exon108597   119   III: 13190128-13190246 Caenorhabditis elegans
Exon108603   335   III: 13191292-13191626 Caenorhabditis elegans
Exon108609   332   III: 13194529-13194860 Caenorhabditis elegans
Exon108615   186   III: 13195993-13196178 Caenorhabditis elegans
Exon108621   129   III: 13197610-13197738 Caenorhabditis elegans
Exon108627   111   III: 13200771-13200881 Caenorhabditis elegans
Exon108633   129   III: 13203866-13203994 Caenorhabditis elegans
Exon108639   610   III: 13204286-13204895 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y39E4B.12a.1 13187392 13204895 1

1 Sequence

Length
2408

1 Sequence Ontology Term

Identifier Name Description
transcript