WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39E4B.5.1 Sequence Name  Y39E4B.5.1
Length (nt)  1699   Chromosome Location  III: 13169916-13173106
Chromosome . Primary Identifier  III Chromosome Location . Start  13169916
Chromosome Location . End  13173106 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012716 Y39E4B.5 Y39E4B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39E4B.5 Y39E4B.5 1518   III: 13169918-13170033

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39E4B.5.1 13169916 13173106 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108576   118   III: 13169916-13170033 Caenorhabditis elegans
Exon108577   67   III: 13170080-13170146 Caenorhabditis elegans
Exon108578   452   III: 13170831-13171282 Caenorhabditis elegans
Exon108579   258   III: 13171338-13171595 Caenorhabditis elegans
Exon108580   385   III: 13171650-13172034 Caenorhabditis elegans
Exon108581   419   III: 13172688-13173106 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39E4B.5.1 13169916 13173106 1

1 Sequence

Length
1699

1 Sequence Ontology Term

Identifier Name Description
transcript