WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39E4B.3a.1 Sequence Name  Y39E4B.3a.1
Length (nt)  1452   Chromosome Location  III: 13087479-13099455
Chromosome . Primary Identifier  III Chromosome Location . Start  13087479
Chromosome Location . End  13099455 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004164 pqn-83 Y39E4B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39E4B.3a Y39E4B.3a 1188   III: 13087743-13087933

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39E4B.3a.1 13087479 13099455 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108444   455   III: 13087479-13087933 Caenorhabditis elegans
Exon108445   113   III: 13089237-13089349 Caenorhabditis elegans
Exon108449   173   III: 13090795-13090967 Caenorhabditis elegans
Exon108454   117   III: 13093882-13093998 Caenorhabditis elegans
Exon108457   241   III: 13096676-13096916 Caenorhabditis elegans
Exon108460   353   III: 13099103-13099455 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39E4B.3a.1 13087479 13099455 -1

1 Sequence

Length
1452

1 Sequence Ontology Term

Identifier Name Description
transcript