WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39E4B.3b.1 Sequence Name  Y39E4B.3b.1
Length (nt)  1510   Chromosome Location  III: 13087475-13099461
Chromosome . Primary Identifier  III Chromosome Location . Start  13087475
Chromosome Location . End  13099461 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4B.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004164 pqn-83 Y39E4B.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39E4B.3b Y39E4B.3b 924   III: 13090425-13090464

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39E4B.3b.1 13087475 13099461 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108443   459   III: 13087475-13087933 Caenorhabditis elegans
Exon108446   113   III: 13089237-13089349 Caenorhabditis elegans
Exon108448   48   III: 13090417-13090464 Caenorhabditis elegans
Exon108450   173   III: 13090795-13090967 Caenorhabditis elegans
Exon108455   117   III: 13093882-13093998 Caenorhabditis elegans
Exon108458   241   III: 13096676-13096916 Caenorhabditis elegans
Exon108461   359   III: 13099103-13099461 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39E4B.3b.1 13087475 13099461 -1

1 Sequence

Length
1510

1 Sequence Ontology Term

Identifier Name Description
transcript