WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014639 Gene Name  ZK1010.t1
Sequence Name  ? ZK1010.t1 Organism  Caenorhabditis elegans
Automated Description  Is affected by swsn-1 based on RNA-seq studies. Biotype  SO:0001272
Genetic Position  :± Length (nt)  ? 77
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Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This Gene is in one list:
metrics_list_union (10192)

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014639

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:ZK1010.t1 ZK1010.t1 77   III: 13009423-13009499
 

Other

0 CDSs

4 RNAi Result

WormBase ID
WBRNAi00001516
WBRNAi00059042
WBRNAi00006097
WBRNAi00038113

12 Allele

Public Name
gk963887
gk963904
gk963552
gk963763
gk963762
WBVar00248655
WBVar00248656
WBVar00248657
WBVar01964067
ok482
gk765305
gk867363

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
WBGene00014639 13009423 13009499 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts that showed significantly increased expression in swsn-1(os22ts) comparing to in N2 animals at young adult worms. DESeq2, FDR<0.05 and fold-change 2. (Threshold set by WormBase curator.) WBPaper00060764:swsn-1(os22ts)_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier 		Start End Strand
WBGene00014639 13009423 13009499 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
77

1 Sequence Ontology Term

Identifier Name Description
gene  

0 Strains

0 Upstream Intergenic Region