WormMine

WSWS298

An integrated data resource for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y39E4A.2a.1 Sequence Name  Y39E4A.2a.1
Length (nt)  1414   Chromosome Location  III: 12952970-12966995
Chromosome . Primary Identifier  III Chromosome Location . Start  12952970
Chromosome Location . End  12966995 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y39E4A.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012712 ttm-1 Y39E4A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y39E4A.2a Y39E4A.2a 1176   III: 12953205-12953353

1 Chromosome

WormBase ID Organism Length (nt)
III Caenorhabditis elegans 13783801  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y39E4A.2a.1 12952970 12966995 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon108269   384   III: 12952970-12953353 Caenorhabditis elegans
Exon108271   793   III: 12954541-12955333 Caenorhabditis elegans
Exon108276   170   III: 12965174-12965343 Caenorhabditis elegans
Exon108277   67   III: 12966929-12966995 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y39E4A.2a.1 12952970 12966995 -1

1 Sequence

Length
1414

1 Sequence Ontology Term

Identifier Name Description
transcript